Stem-loop sequence ame-mir-3049

Accession MI0016158
Description Apis mellifera miR-3049 stem-loop
Stem-loop 
u c     uaaaagcaauu    -     uc     u        u     c         gguca 
 g aggag           gaau cgugu  ccagg cgggaagg aguug ggcggauuu     a
 | |||||           |||| |||||  ||||| |||||||| ||||| |||||||||      
 c uccuc           cuua gcgcg  gguuc gccuuucc ucaac cugccugaa     c
u c     -----------    a     gu     u        -     -         aacgu
Get sequence
Deep sequencing
3 reads, 1 experiments
Genome context
Coordinates (Amel_4.0) Overlapping transcripts
GroupUn.139: 31078-31197 [-]
intergenic
Database links

Mature sequence ame-miR-3049-5p

Accession MIMAT0022968
Sequence

36 -  

ucgggaagguaguugcggcggau

 - 58

Get sequence
Evidence experimental; Solexa [2]

Mature sequence ame-miR-3049-3p

Accession MIMAT0018528
Previous IDs ame-miR-3049
Sequence

76 -  

uccguccaacuccuuuccgucu

 - 97

Get sequence
Evidence experimental; SOLID [1]

References

1
PMID:20807255 "Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera" Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F Insect Mol Biol. 19:799-805(2010).
2
PMID:22458842 "Next-generation small RNA sequencing for microRNAs profiling in Apis mellifera: comparison between nurses and foragers" Liu F, Peng W, Li Z, Li W, Li L, Pan J, Zhang S, Miao Y, Chen S, Su S Insect Mol Biol. 21:297-303(2012).