Stem-loop sequence ame-mir-3752

Accession MI0016152
Description Apis mellifera miR-3752 stem-loop
Stem-loop 
-  g    acgaau  c      -gag     a        --aauu     caacgc 
 gu cgca      ag gaagcu    cuaua uuuagaaa      aucga      g
 || ||||      || ||||||    ||||| ||||||||      |||||      u
 ca gcgu      uc cuuuga    ggugu aaaucuuu      uagcu      u
c  a    ------  -      aaua     c        accuuu     uccccu
Get sequence
Deep sequencing
15 reads, 1 experiments
Genome context
Coordinates (Amel_4.0) Overlapping transcripts
Group9.23: 896739-896846 [-]
intergenic
Clustered miRNAs
< 10kb from ame-mir-3752
ame-mir-3751 Group9.23: 900046-900182 [+]
ame-mir-3752 Group9.23: 896739-896846 [-]
Database links

Mature sequence ame-miR-3752

Accession MIMAT0018522
Sequence

85 -  

guggauaaaguuuccuugcgaa

 - 106

Get sequence
Deep sequencing 1 reads, 1 experiments
Evidence experimental; SOLID [1]

References

1
PMID:20807255 "Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera" Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F Insect Mol Biol. 19:799-805(2010).