Stem-loop sequence hsa-mir-3689a

Accession MI0016090
Description Homo sapiens miR-3689a stem-loop
Gene family MIPF0001144; mir-3689
Stem-loop 
  ug    g gu         g    ug     ug ga 
cc  ggag u  gauaucaug uucc  ggagg  u  u
||  |||| |  ||||||||| ||||  |||||  |   
gg  ccuu g  cuauagugu gagg  ccuuc  g  c
  gu    g ug         g    gu     gu uc
Get sequence
Deep sequencing
1 reads, 1 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr9: 137741333-137741410 [-]
intergenic
Clustered miRNAs
< 10kb from hsa-mir-3689a
hsa-mir-3689f chr9: 137742588-137742653 [-]
hsa-mir-3689e chr9: 137742416-137742487 [-]
hsa-mir-3689d-2 chr9: 137742123-137742202 [-]
hsa-mir-3689b chr9: 137741971-137742118 [-]
hsa-mir-3689d-1 chr9: 137741455-137741528 [-]
hsa-mir-3689a chr9: 137741333-137741410 [-]
hsa-mir-3689c chr9: 137741144-137741215 [-]
Database links

Mature sequence hsa-miR-3689a-5p

Accession MIMAT0018117
Sequence

10 -  

ugugauaucaugguuccuggga

 - 31

Get sequence
Evidence experimental; Solexa [1-2]
Predicted targets

Mature sequence hsa-miR-3689a-3p

Accession MIMAT0018118
Sequence

50 -  

cugggaggugugauaucguggu

 - 71

Get sequence
Deep sequencing 1 reads, 1 experiments
Evidence experimental; Solexa [1-2]
Predicted targets

References

1
PMID:20459673 "Analysis of microRNA transcriptome by deep sequencing of small RNA libraries of peripheral blood" Vaz C, Ahmad HM, Sharma P, Gupta R, Kumar L, Kulshreshtha R, Bhattacharya A BMC Genomics. 11:288(2010).
2
PMID:20224791 "Discovery of novel microRNAs in female reproductive tract using next generation sequencing" Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH PLoS One. 5:e9637(2010).