Stem-loop sequence hsa-mir-3686

Accession

MI0016087

Description

Homo sapiens miR-3686 stem-loop

Stem-loop

        a         c                 u   ug 
cucaccuc uucauuuac uucucuuacagaucacu uuc  c
|||||||| ||||||||| ||||||||||||||||| |||   
gaguggag aaguaaaug aagagaaugucuaguga agg  a
        a         a                 c   uc 

Genome context

• Coordinates (GRCh37.p5): chr8: 130496303-130496388 [-]
• Overlapping transcripts:

  sense

  OTTHUMT00000380580 ; RP11-3O20.1-002; intron 1

  OTTHUMT00000380581 ; RP11-3O20.1-001; intron 1

  OTTHUMT00000380582 ; RP11-3O20.1-003; intron 1

  OTTHUMT00000380580 ; RP11-3O20.1-002; intron 1

  OTTHUMT00000380581 ; RP11-3O20.1-001; intron 1

  OTTHUMT00000380582 ; RP11-3O20.1-003; intron 1

  OTTHUMT00000380580 ; RP11-3O20.1-002; intron 1

  OTTHUMT00000380581 ; RP11-3O20.1-001; intron 1

  OTTHUMT00000380582 ; RP11-3O20.1-003; intron 1

  ENST00000523151 ; RP11-3O20.1-002; intron 1

  ENST00000446592 ; RP11-3O20.1-001; intron 1

  ENST00000520048 ; RP11-3O20.1-003; intron 1

  ENST00000523151 ; CCDC26-002; intron 1

  ENST00000446592 ; CCDC26-001; intron 1

  ENST00000520048 ; CCDC26-003; intron 1

  ENST00000523151 ; CCDC26-002; intron 1

  ENST00000446592 ; CCDC26-001; intron 1

  ENST00000520048 ; CCDC26-003; intron 1

Database links

• ENTREZGENE: 100500839;MIR3686

Mature sequence hsa-miR-3686

• Accession: MIMAT0018114
• Sequence: 55 - aucuguaagagaaaguaaauga - 76
• Evidence: experimental; Solexa [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-3686
  • MIRDB:hsa-miR-3686
  • RNA22-HSA:hsa-miR-3686
  • TARGETMINER:hsa-miR-3686

References

1. PMID:20459673 "Analysis of microRNA transcriptome by deep sequencing of small RNA libraries of peripheral blood" Vaz C, Ahmad HM, Sharma P, Gupta R, Kumar L, Kulshreshtha R, Bhattacharya A BMC Genomics. 11:288(2010).