Stem-loop sequence hsa-mir-3678

Accession

MI0016079

Description

Homo sapiens miR-3678 stem-loop

Stem-loop

                        u   uugaau   ug      uu 
gaauccgguccguacaaacucugc gug      gau  gugagu  g
|||||||||||||||||||||||| |||      |||  ||||||   
cuuaggccaggcauguuugagacg cac      uua  uacucg  u
                        u   --uaag   gu      uu 

Deep sequencing

2 reads, 2 experiments

Genome context

• Coordinates (GRCh37.p5): chr17: 73402150-73402243 [+]
• Overlapping transcripts:

  intergenic

Database links

• ENTREZGENE: 100500841;MIR3678

Mature sequence hsa-miR-3678-5p

• Accession: MIMAT0018102
• Sequence: 9 - uccguacaaacucugcugug - 28
• Deep sequencing: 2 reads, 2 experiments
• Evidence: experimental; Solexa [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-3678-5p
  • MIRDB:hsa-miR-3678-5p
  • RNA22-HSA:hsa-miR-3678-5p
  • TARGETMINER:hsa-miR-3678-5p

Mature sequence hsa-miR-3678-3p

• Accession: MIMAT0018103
• Sequence: 69 - cugcagaguuuguacggaccgg - 90
• Evidence: experimental; Solexa [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-3678-3p
  • MIRDB:hsa-miR-3678-3p
  • RNA22-HSA:hsa-miR-3678-3p
  • TARGETMINER:hsa-miR-3678-3p

References

1. PMID:20459673 "Analysis of microRNA transcriptome by deep sequencing of small RNA libraries of peripheral blood" Vaz C, Ahmad HM, Sharma P, Gupta R, Kumar L, Kulshreshtha R, Bhattacharya A BMC Genomics. 11:288(2010).