Stem-loop sequence hsa-mir-3662

Accession

MI0016063

Description

Homo sapiens miR-3662 stem-loop

Stem-loop

----------      uuccucaacgc   -       -    c   c c     cca 
          uguguu           uca caguuac acuu uua u ucaau   u
          ||||||           ||| ||||||| |||| ||| | |||||    
          acacga           agu gucagug ugag agu a aguua   u
aaccgacuaa      -----------   a       a    u   a a     uac 

Deep sequencing

39 reads, 10 experiments

Genome context

• Coordinates (GRCh37.p5): chr6: 135300476-135300570 [-]
• Overlapping transcripts:

  sense

  OTTHUMT00000042344 ; HBS1L-005; intron 1

  OTTHUMT00000042344 ; HBS1L-005; intron 1

  OTTHUMT00000042344 ; HBS1L-005; intron 1

  OTTHUMT00000391463 ; HBS1L-010; intron 10

  OTTHUMT00000391466 ; HBS1L-009; intron 10

  OTTHUMT00000391467 ; HBS1L-008; intron 10

  OTTHUMT00000391463 ; HBS1L-010; intron 10

  OTTHUMT00000391466 ; HBS1L-009; intron 10

  OTTHUMT00000391467 ; HBS1L-008; intron 10

  OTTHUMT00000391463 ; HBS1L-010; intron 10

  OTTHUMT00000391466 ; HBS1L-009; intron 10

  OTTHUMT00000391467 ; HBS1L-008; intron 10

  OTTHUMT00000391464 ; HBS1L-007; intron 12

  OTTHUMT00000391465 ; HBS1L-006; intron 12

  OTTHUMT00000391464 ; HBS1L-007; intron 12

  OTTHUMT00000391465 ; HBS1L-006; intron 12

  OTTHUMT00000391464 ; HBS1L-007; intron 12

  OTTHUMT00000391465 ; HBS1L-006; intron 12

  OTTHUMT00000042339 ; HBS1L-001; intron 13

  OTTHUMT00000042339 ; HBS1L-001; intron 13

  OTTHUMT00000042339 ; HBS1L-001; intron 13

  ENST00000527005 ; HBS1L-005; intron 1

  ENST00000527005 ; HBS1L-005; intron 1

  ENST00000527005 ; HBS1L-005; intron 1

  ENST00000527578 ; HBS1L-010; intron 10

  ENST00000445176 ; HBS1L-202; intron 10

  ENST00000367824 ; HBS1L-201; intron 10

  ENST00000526100 ; HBS1L-008; intron 10

  ENST00000533274 ; HBS1L-009; intron 10

  ENST00000527578 ; HBS1L-010; intron 10

  ENST00000533274 ; HBS1L-009; intron 10

  ENST00000526100 ; HBS1L-008; intron 10

  ENST00000367824 ; HBS1L-201; intron 10

  ENST00000445176 ; HBS1L-202; intron 10

  ENST00000527578 ; HBS1L-010; intron 10

  ENST00000533274 ; HBS1L-009; intron 10

  ENST00000526100 ; HBS1L-008; intron 10

  ENST00000367824 ; HBS1L-201; intron 10

  ENST00000445176 ; HBS1L-202; intron 10

  ENST00000367826 ; HBS1L-006; intron 12

  ENST00000415177 ; HBS1L-007; intron 12

  ENST00000415177 ; HBS1L-007; intron 12

  ENST00000367826 ; HBS1L-006; intron 12

  ENST00000415177 ; HBS1L-007; intron 12

  ENST00000367826 ; HBS1L-006; intron 12

  ENST00000367837 ; HBS1L-001; intron 13

  ENST00000367837 ; HBS1L-001; intron 13

  ENST00000367837 ; HBS1L-001; intron 13

Database links

• ENTREZGENE: 100500880;MIR3662

Mature sequence hsa-miR-3662

• Accession: MIMAT0018083
• Sequence: 55 - gaaaaugaugaguagugacugaug - 78
• Deep sequencing: 39 reads, 10 experiments
• Evidence: experimental; Northern [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-3662
  • MIRDB:hsa-miR-3662
  • RNA22-HSA:hsa-miR-3662
  • TARGETMINER:hsa-miR-3662

References

1. PMID:20532037 "Re-inspection of small RNA sequence datasets reveals several novel human miRNA genes" Hansen TB, Bramsen JB, Kjems J PLoS One. 5:e10961(2010).