Stem-loop sequence hsa-mir-3654

Accession

MI0016054

Description

Homo sapiens miR-3654 stem-loop

Stem-loop

u  a g    gcaa   ca  a     a 
 uc u agcu    ucu  uc cugga u
 || | ||||    |||  || |||||  
 ag a ucga    agg  ag gaccu g
a  g g    --ac   uc  c     u 

Deep sequencing

3 reads, 3 experiments

Genome context

• Coordinates (GRCh37.p5): chr7: 132719620-132719675 [-]
• Overlapping transcripts:

  sense

  OTTHUMT00000338900 ; CHCHD3-002; intron 1

  OTTHUMT00000338905 ; CHCHD3-007; intron 1

  OTTHUMT00000338906 ; CHCHD3-008; intron 1

  OTTHUMT00000338900 ; CHCHD3-002; intron 1

  OTTHUMT00000338905 ; CHCHD3-007; intron 1

  OTTHUMT00000338906 ; CHCHD3-008; intron 1

  OTTHUMT00000338900 ; CHCHD3-002; intron 1

  OTTHUMT00000338905 ; CHCHD3-007; intron 1

  OTTHUMT00000338906 ; CHCHD3-008; intron 1

  OTTHUMT00000338899 ; CHCHD3-001; intron 2

  OTTHUMT00000338901 ; CHCHD3-003; intron 2

  OTTHUMT00000338902 ; CHCHD3-004; intron 2

  OTTHUMT00000338903 ; CHCHD3-005; intron 2

  OTTHUMT00000338899 ; CHCHD3-001; intron 2

  OTTHUMT00000338901 ; CHCHD3-003; intron 2

  OTTHUMT00000338902 ; CHCHD3-004; intron 2

  OTTHUMT00000338903 ; CHCHD3-005; intron 2

  OTTHUMT00000338899 ; CHCHD3-001; intron 2

  OTTHUMT00000338901 ; CHCHD3-003; intron 2

  OTTHUMT00000338902 ; CHCHD3-004; intron 2

  OTTHUMT00000338903 ; CHCHD3-005; intron 2

  ENST00000476546 ; CHCHD3-002; intron 1

  ENST00000496427 ; CHCHD3-007; intron 1

  ENST00000481152 ; CHCHD3-008; intron 1

  ENST00000476546 ; CHCHD3-002; intron 1

  ENST00000496427 ; CHCHD3-007; intron 1

  ENST00000481152 ; CHCHD3-008; intron 1

  ENST00000476546 ; CHCHD3-002; intron 1

  ENST00000496427 ; CHCHD3-007; intron 1

  ENST00000481152 ; CHCHD3-008; intron 1

  ENST00000262570 ; CHCHD3-001; intron 2

  ENST00000448878 ; CHCHD3-003; intron 2

  ENST00000423635 ; CHCHD3-004; intron 2

  ENST00000466644 ; CHCHD3-005; intron 2

  ENST00000542753 ; CHCHD3-201; intron 2

  ENST00000262570 ; CHCHD3-001; intron 2

  ENST00000448878 ; CHCHD3-003; intron 2

  ENST00000423635 ; CHCHD3-004; intron 2

  ENST00000466644 ; CHCHD3-005; intron 2

  ENST00000542753 ; CHCHD3-201; intron 2

  ENST00000262570 ; CHCHD3-001; intron 2

  ENST00000448878 ; CHCHD3-003; intron 2

  ENST00000423635 ; CHCHD3-004; intron 2

  ENST00000466644 ; CHCHD3-005; intron 2

  ENST00000542753 ; CHCHD3-201; intron 2

  ENST00000448615 ; AC008038.1-201; exon 3

  ENST00000448615 ; AC008038.1-201; exon 3

  ENST00000448615 ; hsa-mir-3654.1-201; exon 3

Database links

• ENTREZGENE: 100500804;MIR3654

Mature sequence hsa-miR-3654

• Accession: MIMAT0018074
• Sequence: 38 - gacuggacaagcugaggaa - 56
• Evidence: experimental; 454 [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-3654
  • MIRDB:hsa-miR-3654
  • RNA22-HSA:hsa-miR-3654
  • TARGETMINER:hsa-miR-3654

References

1. PMID:20483914 "Discovery of microRNAs and other small RNAs in solid tumors" Meiri E, Levy A, Benjamin H, Ben-David M, Cohen L, Dov A, Dromi N, Elyakim E, Yerushalmi N, Zion O, Lithwick-Yanai G, Sitbon E Nucleic Acids Res. 38:6234-6246(2010).