Stem-loop sequence hsa-mir-3648

Accession MI0016048
Description Homo sapiens miR-3648 stem-loop
Stem-loop 
     ---cu     -     u  u     ga            g  ga    -           -c     -   -       u   --    g 
cgcga     gcggc ggcgg gg ggggg  gccgcggggauc cc  gggc cggucggccgc  ccggg ugc cgcgcgg gcc  gccg c
|||||     ||||| ||||| || |||||  |||||||||||| ||  |||| |||||||||||  ||||| ||| ||||||| |||  ||||  
gcgcu     cgccg ccgcc cc ucccc  cggugccccugg gg  cucg gccggcuggcg  ggccc gug gcgcgcc cgg  uggc g
     cuuuc     g     -  u     ug            -  ag    c           uc     u   u       c   ag    g
Get sequence
Deep sequencing
255 reads, 24 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr21: 9825832-9826011 [+]
intergenic
Clustered miRNAs
< 10kb from hsa-mir-3648
hsa-mir-3648 chr21: 9825832-9826011 [+]
hsa-mir-3687 chr21: 9826203-9826263 [+]
Database links

Mature sequence hsa-miR-3648

Accession MIMAT0018068
Sequence

28 -  

agccgcggggaucgccgaggg

 - 48

Get sequence
Deep sequencing 148 reads, 18 experiments
Evidence experimental; 454 [1]
Predicted targets

References

1
PMID:20483914 "Discovery of microRNAs and other small RNAs in solid tumors" Meiri E, Levy A, Benjamin H, Ben-David M, Cohen L, Dov A, Dromi N, Elyakim E, Yerushalmi N, Zion O, Lithwick-Yanai G, Sitbon E Nucleic Acids Res. 38:6234-6246(2010).