Stem-loop sequence vvi-MIR3629a

Accession MI0016022
Description Vitis vinifera miR3629a stem-loop
Stem-loop 
u          cg                    a     ---u g  uuua     uuaucgacuuggauugugcugcuaguugcugcacauu 
 uuuuuuuucc  cauuuucucagcagccaagc gagug    g gg    agaga                                     u
 ||||||||||  |||||||||||||||||||| |||||    | ||    |||||                                     u
 aagaaaaagg  guaaaagagucgucgguuug uucac    u cc    ucucu                                     c
a          au                    a     uauu g  ----     auguuuagguuugggucaaccuuggugaacuuugggu
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Genome context
Coordinates (Genoscope-20100122) Overlapping transcripts
chr13: 18253988-18254169 [+]
intergenic

Mature sequence vvi-miR3629a-5p

Accession MIMAT0018021
Previous IDs vvi-miR3629a*
Sequence

12 -  

cgcauuuucucagcagccaag

 - 32

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Evidence experimental; Solexa [1]

Mature sequence vvi-miR3629a-3p

Accession MIMAT0018022
Previous IDs vvi-miR3629a
Sequence

154 -  

ggcugcugagaaaauguagga

 - 174

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Evidence experimental; Solexa [1]

References

1
PMID:20230504 "Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis" Pantaleo V, Szittya G, Moxon S, Miozzi L, Moulton V, Dalmay T, Burgyan J Plant J. 62:960-976(2010).