Stem-loop sequence hsa-mir-3621

Accession MI0016012
Description Homo sapiens miR-3621 stem-loop
Stem-loop 
gugagcug   -       ------    -   g   ugcag      gc 
        cug gggacgc      gggu cgg guc     ggcggu  g
        ||| |||||||      |||| ||| |||     ||||||   
        gac cccugug      uccg gcc cag     ccgccg  g
--------   a       ucuguu    c   g   -ucca      ac
Get sequence
Deep sequencing
45 reads, 11 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr9: 140063638-140063722 [-]
sense
OTTHUMT00000055307 ; LRRC26-001; intron 1
OTTHUMT00000055307 ; LRRC26-001; intron 1
OTTHUMT00000055307 ; LRRC26-001; intron 1
OTTHUMT00000431926 ; RP11-350O14.18-001; intron 2
OTTHUMT00000431926 ; RP11-350O14.18-001; intron 2
ENST00000371542 ; LRRC26-001; intron 1
ENST00000371542 ; LRRC26-001; intron 1
ENST00000371542 ; LRRC26-001; intron 1
ENST00000568665 ; RP11-350O14.18-001; intron 2
ENST00000568665 ; RP11-350O14.18-001; intron 2
Database links

Mature sequence hsa-miR-3621

Accession MIMAT0018002
Sequence

16 -  

cgcgggucggggucugcagg

 - 35

Get sequence
Deep sequencing 45 reads, 11 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:20459774 "Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls" Witten D, Tibshirani R, Gu SG, Fire A, Lui WO BMC Biol. 8:58(2010).