Stem-loop sequence hsa-mir-3617

Accession MI0016007
Description Homo sapiens miR-3617 stem-loop
Gene family MIPF0001477; mir-3617
Stem-loop 
   u  u      -      -u   aa        uagaa 
agg ca agaaag acauag  ugc  gaugggau     a
||| || |||||| ||||||  |||  ||||||||      
ucc gu ucuuuc uguauc  acg  cuacucug     c
   c  c      c      cc   -a        uauac
Get sequence
Deep sequencing
2 reads, 2 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr20: 44333741-44333819 [-]
antisense
OTTHUMT00000106946 ; WFDC13-001; intron 2
OTTHUMT00000106946 ; WFDC13-001; intron 2
OTTHUMT00000106946 ; WFDC13-001; intron 2
ENST00000305479 ; WFDC13-001; intron 2
ENST00000305479 ; WFDC13-001; intron 2
ENST00000305479 ; WFDC13-001; intron 2
Database links

Mature sequence hsa-miR-3617-5p

Accession MIMAT0017997
Previous IDs hsa-miR-3617
Sequence

10 -  

aaagacauaguugcaagauggg

 - 31

Get sequence
Deep sequencing 1 reads, 1 experiments
Evidence experimental; Solexa [1-2]
Predicted targets

Mature sequence hsa-miR-3617-3p

Accession MIMAT0022966
Sequence

50 -  

caucagcacccuauguccuuucu

 - 72

Get sequence
Deep sequencing 1 reads, 1 experiments
Evidence experimental; Solexa [2]

References

1
PMID:20459774 "Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls" Witten D, Tibshirani R, Gu SG, Fire A, Lui WO BMC Biol. 8:58(2010).
2
PMID:21807764 "Deep sequencing of small RNAs from human skin reveals major alterations in the psoriasis miRNAome" Joyce CE, Zhou X, Xia J, Ryan C, Thrash B, Menter A, Zhang W, Bowcock AM Hum Mol Genet. 20:4025-4040(2011).