Stem-loop sequence bta-mir-3578

Accession MI0015945
Description Bos taurus miR-3578 stem-loop
Gene family MIPF0001166; mir-3578
Stem-loop 
uu       -   aaaagu     c    aau       caua 
  ugguacu gaa      guugu cgug   gauucgu    a
  ||||||| |||      ||||| ||||   |||||||     
  accauga cuu      caaca gcac   cuaagcg    g
ac       a   -cucuu     a    cac       aaau
Get sequence
Genome context
Coordinates (UMD3.1) Overlapping transcripts
chr21: 67592873-67592958 [-]
antisense
Clustered miRNAs
< 10kb from bta-mir-3578
bta-mir-3957 chr21: 67602730-67602806 [+]
bta-mir-541 chr21: 67602344-67602427 [+]
bta-mir-377 chr21: 67600490-67600558 [+]
bta-mir-496 chr21: 67598869-67598969 [+]
bta-mir-154b chr21: 67598357-67598437 [+]
bta-mir-154a chr21: 67598039-67598122 [+]
bta-mir-453 chr21: 67594686-67594765 [+]
bta-mir-485 chr21: 67593955-67594027 [+]
bta-mir-134 chr21: 67593257-67593329 [+]
bta-mir-382 chr21: 67592878-67592953 [+]
bta-mir-3578 chr21: 67592873-67592958 [-]
bta-mir-487a chr21: 67589864-67589943 [+]
bta-mir-411c chr21: 67589478-67589551 [+]
bta-mir-655 chr21: 67587315-67587411 [+]
bta-mir-544a chr21: 67586358-67586448 [+]
bta-mir-539 chr21: 67584372-67584449 [+]
bta-mir-487b chr21: 67583558-67583641 [+]
bta-mir-381 chr21: 67583073-67583147 [+]
Database links

Mature sequence bta-miR-3578

Accession MIMAT0016934
Sequence

51 -  

gaauccaccacgaacaacuuc

 - 71

Get sequence
Evidence experimental; cloned [1]

References

1
PMID:19765282 "Identification and characterization of miRNAs expressed in the bovine ovary" Hossain MM, Ghanem N, Hoelker M, Rings F, Phatsara C, Tholen E, Schellander K, Tesfaye D BMC Genomics. 10:443(2009).