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miRBase |
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Stem-loop sequence ssc-mir-1271 |
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Accession | MI0015922 (change log) | ||||
Description | Sus scrofa miR-1271 stem-loop | ||||
Gene family | MIPF0000483; mir-1271 | ||||
Literature search |
1 open access papers mention ssc-mir-1271 | ||||
Stem-loop |
-- au c a ua 5' uag cagugcuuggcac uagua gcacucagua u ||| ||||||||||||| ||||| |||||||||| 3' guc guuacggaccgug aucgu cgugaguugu a ga gu u c uc |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
Mature sequence ssc-miR-1271-5p |
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Accession | MIMAT0037381 |
Sequence |
11 - cuuggcaccuaguaagcacuc - 31 |
Deep sequencing | 7834 reads, 15 experiments |
Evidence | experimental; Illumina [3] |
Mature sequence ssc-miR-1271-3p |
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Accession | MIMAT0017967 |
Sequence |
49 - ugccugcuaugugccaggca - 68 |
Deep sequencing | 13 reads, 6 experiments |
Evidence | experimental; Illumina [1-2] |
References |
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1 |
PMID:20433717
"Deciphering the porcine intestinal microRNA transcriptome"
BMC Genomics. 11:275(2010).
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2 |
PMID:24499489
"Exploration of microRNAs in porcine milk exosomes"
BMC Genomics. 15:100(2014).
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3 |
PMID:25230983
"The characteristics of the porcine (Sus scrofa) liver miRNAome with the use of next generation sequencing"
J Appl Genet. 56:239-252(2015).
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