Stem-loop sequence hsa-mir-4284

Accession

MI0015893

Description

Homo sapiens miR-4284 stem-loop

Stem-loop

---g      ga       -ac  c     --a  aaa    g 
    uucugu  ggggcuc   au acccc   uc   gugg g
    ||||||  |||||||   || |||||   ||   ||||  
    gagaua  uuucgag   ug ugggg   ag   uacu a
ggcg      -g       gau  a     gag  ggg    c 

Deep sequencing

932 reads, 20 experiments

Genome context

• Coordinates (GRCh37.p5): chr7: 73125647-73125727 [+]
• Overlapping transcripts:

  antisense

  OTTHUMT00000268422 ; STX1A-001; intron 1

  OTTHUMT00000268423 ; STX1A-002; intron 1

  OTTHUMT00000268431 ; STX1A-010; intron 1

  OTTHUMT00000268424 ; STX1A-003; intron 1

  OTTHUMT00000268428 ; STX1A-007; intron 1

  OTTHUMT00000268422 ; STX1A-001; intron 1

  OTTHUMT00000268423 ; STX1A-002; intron 1

  OTTHUMT00000268431 ; STX1A-010; intron 1

  OTTHUMT00000268424 ; STX1A-003; intron 1

  OTTHUMT00000268428 ; STX1A-007; intron 1

  OTTHUMT00000268422 ; STX1A-001; intron 1

  OTTHUMT00000268423 ; STX1A-002; intron 1

  OTTHUMT00000268431 ; STX1A-010; intron 1

  OTTHUMT00000268424 ; STX1A-003; intron 1

  OTTHUMT00000268428 ; STX1A-007; intron 1

  OTTHUMT00000268425 ; STX1A-004; intron 2

  OTTHUMT00000268425 ; STX1A-004; intron 2

  OTTHUMT00000268425 ; STX1A-004; intron 2

  ENST00000222812 ; STX1A-001; intron 1

  ENST00000395156 ; STX1A-002; intron 1

  ENST00000395154 ; STX1A-010; intron 1

  ENST00000395155 ; STX1A-003; intron 1

  ENST00000462135 ; STX1A-007; intron 1

  ENST00000428377 ; STX1A-201; intron 1

  ENST00000222812 ; STX1A-001; intron 1

  ENST00000395156 ; STX1A-002; intron 1

  ENST00000395154 ; STX1A-010; intron 1

  ENST00000395155 ; STX1A-003; intron 1

  ENST00000462135 ; STX1A-007; intron 1

  ENST00000428377 ; STX1A-201; intron 1

  ENST00000222812 ; STX1A-001; intron 1

  ENST00000395156 ; STX1A-002; intron 1

  ENST00000395154 ; STX1A-010; intron 1

  ENST00000395155 ; STX1A-003; intron 1

  ENST00000462135 ; STX1A-007; intron 1

  ENST00000470878 ; STX1A-004; intron 2

  ENST00000470878 ; STX1A-004; intron 2

  ENST00000470878 ; STX1A-004; intron 2

Database links

• ENTREZGENE: 100422948;MIR4284

Mature sequence hsa-miR-4284

• Accession: MIMAT0016915
• Sequence: 11 - gggcucacaucaccccau - 28
• Deep sequencing: 932 reads, 20 experiments
• Evidence: experimental; SOLiD [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-4284
  • MICRORNA.ORG:hsa-miR-4284
  • MIRDB:hsa-miR-4284
  • RNA22-HSA:hsa-miR-4284
  • TARGETMINER:hsa-miR-4284

References

1. PMID:19784364 "Ago2 immunoprecipitation identifies predicted microRNAs in human embryonic stem cells and neural precursors" Goff LA, Davila J, Swerdel MR, Moore JC, Cohen RI, Wu H, Sun YE, Hart RP PLoS One. 4:e7192(2009).