Stem-loop sequence hsa-mir-4312

Accession

MI0015842

Description

Homo sapiens miR-4312 stem-loop

Stem-loop

--gaa   uug    c    a        ---a  -    c 
     agg   gggg acag gagcaagg    gc cuuc c
     |||   |||| |||| ||||||||    || ||||  
     ucc   cccc uguc cuuguucc    ug ggag c
gagac   uua    -    -        ggac  a    a 

Deep sequencing

8 reads, 6 experiments

Genome context

• Coordinates (GRCh37.p5): chr15: 69094189-69094264 [-]
• Overlapping transcripts:

  sense

  OTTHUMT00000335525 ; ANP32A-001; intron 1

  OTTHUMT00000335527 ; ANP32A-003; intron 1

  OTTHUMT00000335529 ; ANP32A-005; intron 1

  OTTHUMT00000335530 ; ANP32A-006; intron 1

  OTTHUMT00000335532 ; ANP32A-008; intron 1

  OTTHUMT00000335525 ; ANP32A-001; intron 1

  OTTHUMT00000335527 ; ANP32A-003; intron 1

  OTTHUMT00000335530 ; ANP32A-006; intron 1

  OTTHUMT00000416633 ; ANP32A-010; intron 1

  OTTHUMT00000335532 ; ANP32A-008; intron 1

  OTTHUMT00000335529 ; ANP32A-005; intron 1

  OTTHUMT00000335525 ; ANP32A-001; intron 1

  OTTHUMT00000335527 ; ANP32A-003; intron 1

  OTTHUMT00000335530 ; ANP32A-006; intron 1

  OTTHUMT00000416633 ; ANP32A-010; intron 1

  OTTHUMT00000335532 ; ANP32A-008; intron 1

  OTTHUMT00000335529 ; ANP32A-005; intron 1

  ENST00000465139 ; ANP32A-001; intron 1

  ENST00000409628 ; ANP32A-003; intron 1

  ENST00000267918 ; ANP32A-006; intron 1

  ENST00000495420 ; ANP32A-008; intron 1

  ENST00000495764 ; ANP32A-005; intron 1

  ENST00000358235 ; ANP32A-201; intron 1

  ENST00000465139 ; ANP32A-001; intron 1

  ENST00000409628 ; ANP32A-003; intron 1

  ENST00000267918 ; ANP32A-006; intron 1

  ENST00000560303 ; ANP32A-010; intron 1

  ENST00000495420 ; ANP32A-008; intron 1

  ENST00000495764 ; ANP32A-005; intron 1

  ENST00000358235 ; ANP32A-201; intron 1

  ENST00000465139 ; ANP32A-001; intron 1

  ENST00000409628 ; ANP32A-003; intron 1

  ENST00000267918 ; ANP32A-006; intron 1

  ENST00000560303 ; ANP32A-010; intron 1

  ENST00000495420 ; ANP32A-008; intron 1

  ENST00000495764 ; ANP32A-005; intron 1

Database links

• ENTREZGENE: 100422971;MIR4312

Mature sequence hsa-miR-4312

• Accession: MIMAT0016864
• Sequence: 48 - ggccuuguuccugucccca - 66
• Evidence: experimental; SOLiD [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-4312
  • MICRORNA.ORG:hsa-miR-4312
  • MIRDB:hsa-miR-4312
  • RNA22-HSA:hsa-miR-4312
  • TARGETMINER:hsa-miR-4312

References

1. PMID:19784364 "Ago2 immunoprecipitation identifies predicted microRNAs in human embryonic stem cells and neural precursors" Goff LA, Davila J, Swerdel MR, Moore JC, Cohen RI, Wu H, Sun YE, Hart RP PLoS One. 4:e7192(2009).