Stem-loop sequence hsa-mir-378c

Accession

MI0015825

Description

Homo sapiens miR-378c stem-loop

Stem-loop

g     ---       ggac ug        agag       gg 
 gaggc   caucacu    u  gagucaga    uggaguc  g
 |||||   |||||||    |  ||||||||    |||||||   
 cuccg   guggugg    a  uucagucu    acuucag  u
-     uga       ---a gu        --ca       ac 

Deep sequencing

332801 reads, 27 experiments

Genome context

• Coordinates (GRCh37.p5): chr10: 132760851-132760931 [-]
• Overlapping transcripts:

  intergenic

Database links

• ENTREZGENE: 100422867;MIR378C

Mature sequence hsa-miR-378c

• Accession: MIMAT0016847
• Sequence: 11 - acuggacuuggagucagaagagugg - 35
• Deep sequencing: 332801 reads, 27 experiments
• Evidence: experimental; SOLiD [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-378c
  • MICRORNA.ORG:hsa-miR-378c
  • MIRDB:hsa-miR-378c
  • RNA22-HSA:hsa-miR-378c
  • TARGETMINER:hsa-miR-378c

References

1. PMID:19784364 "Ago2 immunoprecipitation identifies predicted microRNAs in human embryonic stem cells and neural precursors" Goff LA, Davila J, Swerdel MR, Moore JC, Cohen RI, Wu H, Sun YE, Hart RP PLoS One. 4:e7192(2009).