Stem-loop sequence hsa-mir-4296

Accession

MI0015823

Description

Homo sapiens miR-4296 stem-loop

Stem-loop

--uug   uuu         u   -g        g  gaagugg 
     ggc   gaugugggc cag  cucagagg cu       u
     |||   ||||||||| |||  |||||||| ||       u
     cug   cuguaccug guc  gggucuuc gg       g
uuuug   ucu         u   ag        g  gaggggu 

Deep sequencing

reads, experiments

Genome context

• Coordinates (GRCh37.p5): chr10: 126721352-126721439 [-]
• Overlapping transcripts:

  sense

  OTTHUMT00000050903 ; CTBP2-004; intron 2

  OTTHUMT00000050903 ; CTBP2-004; intron 2

  OTTHUMT00000050903 ; CTBP2-004; intron 2

  OTTHUMT00000050900 ; CTBP2-001; intron 3

  OTTHUMT00000050902 ; CTBP2-003; intron 3

  OTTHUMT00000050901 ; CTBP2-002; intron 3

  OTTHUMT00000394563 ; CTBP2-011; intron 3

  OTTHUMT00000050900 ; CTBP2-001; intron 3

  OTTHUMT00000050902 ; CTBP2-003; intron 3

  OTTHUMT00000050901 ; CTBP2-002; intron 3

  OTTHUMT00000394563 ; CTBP2-011; intron 3

  OTTHUMT00000050900 ; CTBP2-001; intron 3

  OTTHUMT00000050902 ; CTBP2-003; intron 3

  OTTHUMT00000050901 ; CTBP2-002; intron 3

  OTTHUMT00000394563 ; CTBP2-011; intron 3

  ENST00000460976 ; CTBP2-004; intron 2

  ENST00000460976 ; CTBP2-004; intron 2

  ENST00000460976 ; CTBP2-004; intron 2

  ENST00000337195 ; CTBP2-001; intron 3

  ENST00000531469 ; CTBP2-003; intron 3

  ENST00000494626 ; CTBP2-002; intron 3

  ENST00000411419 ; CTBP2-011; intron 3

  ENST00000337195 ; CTBP2-001; intron 3

  ENST00000531469 ; CTBP2-003; intron 3

  ENST00000494626 ; CTBP2-002; intron 3

  ENST00000411419 ; CTBP2-011; intron 3

  ENST00000337195 ; CTBP2-001; intron 3

  ENST00000531469 ; CTBP2-003; intron 3

  ENST00000494626 ; CTBP2-002; intron 3

  ENST00000411419 ; CTBP2-011; intron 3

Database links

• ENTREZGENE: 100423041;MIR4296

Mature sequence hsa-miR-4296

• Accession: MIMAT0016845
• Sequence: 11 - augugggcucaggcuca - 27
• Evidence: experimental; SOLiD [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-4296
  • MICRORNA.ORG:hsa-miR-4296
  • MIRDB:hsa-miR-4296
  • RNA22-HSA:hsa-miR-4296
  • TARGETMINER:hsa-miR-4296

References

1. PMID:19784364 "Ago2 immunoprecipitation identifies predicted microRNAs in human embryonic stem cells and neural precursors" Goff LA, Davila J, Swerdel MR, Moore JC, Cohen RI, Wu H, Sun YE, Hart RP PLoS One. 4:e7192(2009).