Stem-loop sequence hsa-mir-4295

Accession

MI0015822 (change log)

Symbol

HGNC:MIR4295

Description

Homo sapiens miR-4295 stem-loop

Literature search

3 open access papers mention hsa-mir-4295
(4 sentences)

Stem-loop

   -      -        g aau     ----     --  --u    c 
5'  cuuugu ggaacagu c   guuuu    ccuug  cc   gugg a
    |||||| |||||||| |   |||||    |||||  ||   |||| a
3'  gagaca ccuuguca g   caaag    ggaac  gg   cacc g
   a      u        - -au     aauc     uu  cuu    a 

Deep sequencing

8 reads, 0 reads per million, 6 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr10: 112634170-112634254 [+]
• Overlapping transcripts:

  sense

  OTTHUMT00000050361 ; PDCD4-001; intron 1

  OTTHUMT00000050362 ; PDCD4-002; intron 1

  OTTHUMT00000050363 ; PDCD4-003; intron 1

  OTTHUMT00000050364 ; PDCD4-004; intron 1

  ENST00000280154 ; PDCD4-001; intron 1

  ENST00000467574 ; PDCD4-002; intron 1

  ENST00000483670 ; PDCD4-003; intron 1

  ENST00000444997 ; PDCD4-004; intron 1

  ENST00000393104 ; PDCD4-201; intron 1

Database links

• EntrezGene:MIR4295
• HGNC:MIR4295
• miRBase Tracker:MI0015822

Mature sequence hsa-miR-4295

• Accession: MIMAT0016844
• Sequence: 11 - cagugcaauguuuuccuu - 28
• Evidence: experimental; SOLiD [1]
• Predicted targets:
  • TargetMiner:hsa-miR-4295
  • TargetScanVert:hsa-miR-4295
  • miRDB:hsa-miR-4295
  • microrna.org:hsa-miR-4295

References

1. PMID:19784364 "Ago2 immunoprecipitation identifies predicted microRNAs in human embryonic stem cells and neural precursors" Goff LA, Davila J, Swerdel MR, Moore JC, Cohen RI, Wu H, Sun YE, Hart RP PLoS One. 4:e7192(2009).