Stem-loop sequence hsa-mir-4295

Accession

MI0015822

Symbol

HGNC:MIR4295

Description

Homo sapiens miR-4295 stem-loop

Stem-loop

   -      -        g aau     ----     --  --u    c 
5'  cuuugu ggaacagu c   guuuu    ccuug  cc   gugg a
    |||||| |||||||| |   |||||    |||||  ||   |||| a
3'  gagaca ccuuguca g   caaag    ggaac  gg   cacc g
   a      u        - -au     aauc     uu  cuu    a 

Deep sequencing

6 reads, 13.5 reads per million, 6 experiments

Confidence

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38): chr10: 112634170-112634254 [+]
• Overlapping transcripts:

  sense

  OTTHUMT00000050361 ; PDCD4-001; intron 1

  OTTHUMT00000050362 ; PDCD4-002; intron 1

  OTTHUMT00000050363 ; PDCD4-003; intron 1

  OTTHUMT00000050364 ; PDCD4-004; intron 1

  ENST00000280154 ; PDCD4-001; intron 1

  ENST00000467574 ; PDCD4-002; intron 1

  ENST00000483670 ; PDCD4-003; intron 1

  ENST00000444997 ; PDCD4-004; intron 1

  ENST00000393104 ; PDCD4-201; intron 1

Database links

• MIRBASE-TRACKER:MI0015822
• ENTREZGENE: 100422909;MIR4295
• HGNC: 38220;MIR4295

Mature sequence hsa-miR-4295

• Accession: MIMAT0016844
• Sequence: 11 - cagugcaauguuuuccuu - 28
• Deep sequencing: 1 reads, 1 experiments
• Evidence: experimental; SOLiD [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-4295
  • MICRORNA.ORG:hsa-miR-4295
  • MIRDB:hsa-miR-4295
  • RNA22-HSA:hsa-miR-4295
  • TARGETMINER:hsa-miR-4295
  • TARGETSCAN-VERT:hsa-miR-4295

References

1. PMID:19784364 "Ago2 immunoprecipitation identifies predicted microRNAs in human embryonic stem cells and neural precursors" Goff LA, Davila J, Swerdel MR, Moore JC, Cohen RI, Wu H, Sun YE, Hart RP PLoS One. 4:e7192(2009).