Stem-loop sequence cin-mir-4138

Accession

MI0015693 (change log)

Description

Ciona intestinalis miR-4138 stem-loop

Stem-loop

   ua       ---aga      a    u 
5'   gaugaag      guaaug uuca u
     |||||||      |||||| |||| g
3'   uuacuuc      uauuac aggu c
   aa       aaacac      a    u 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (JGI2): 5q: 1748121-1748174 [-]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:mir4138
• miRBase Tracker:MI0015693

Mature sequence cin-miR-4138-5p

• Accession: MIMAT0016735
• Sequence: 1 - uagaugaagagaguaauga - 19
• Evidence: experimental; Illumina [1]

References

1. PMID:20370911 "miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data" Hendrix D, Levine M, Shi W Genome Biol. 11:R39(2010).