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miRBase |
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Stem-loop sequence cin-mir-4060 |
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Accession | MI0015611 (change log) | |||||
Description | Ciona intestinalis miR-4060 stem-loop | |||||
Stem-loop |
c uu u ucga 5' auuucacu u caac guugg a |||||||| | |||| ||||| a 3' ugaaguga g guug cgacc u c uu c uaua |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
Mature sequence cin-miR-4060-5p |
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Accession | MIMAT0016608 |
Sequence |
1 - auuucacucuuucaacuguu - 20 |
Deep sequencing | 167 reads, 2 experiments |
Evidence | experimental; Illumina [1] |
Mature sequence cin-miR-4060-3p |
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Accession | MIMAT0016609 |
Sequence |
36 - agccguuguugcagugaagu - 55 |
Deep sequencing | 100 reads, 2 experiments |
Evidence | experimental; Illumina [1] |
References |
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1 |
PMID:20370911
"miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data"
Genome Biol. 11:R39(2010).
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