Stem-loop sequence rno-mir-328b

AccessionMI0015479 (change log)
DescriptionRattus norvegicus miR-328b stem-loop
Literature search

16 open access papers mention rno-mir-328b
(244 sentences)

Stem-loop
        ---a   gg  g    gaag   cga   a     -u   a   -       -a    c 
5' ggagg    ggg  ag gagg    ggg   ggg ggggc  aga ggu agucggc  gaug a
   |||||    |||  || ||||    |||   ||| |||||  ||| ||| |||||||  ||||  
3' ccucc    ccc  uc cucc    ccc   ccc ucccg  ucu ccg ucggucg  uuac a
        ggug   aa  a    ---a   ---   a     uc   c   g       ga    c 
Get sequence
Deep sequencing
33533 reads, 22.2 reads per million, 472 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Rnor_6.0; GCA_000001895.4) Overlapping transcripts
chr14: 45331146-45331263 [+]
intergenic
Database links

Mature sequence rno-miR-328b-3p

Accession MIMAT0017904
Sequence

73 - 

cuggcccucucugcccua

 - 90

Get sequence
Deep sequencing33517 reads, 472 experiments
Evidence experimental; SOLiD [1]
Predicted targets

References

1
PMID:20403161 "Small RNA expression and strain specificity in the rat" Linsen SE, de Wit E, de Bruijn E, Cuppen E BMC Genomics. 11:249(2010).