Stem-loop sequence rno-mir-3584-1

AccessionMI0015458 (change log)
Previous IDsrno-mir-3584
DescriptionRattus norvegicus miR-3584-1 stem-loop
Gene family MIPF0002006; mir-3584
Literature search

4 open access papers mention rno-mir-3584-1
(8 sentences)

Stem-loop
   -    a    g c    ggag     -  g    ga       c 
5'  guag gcug g ggga    uccag ga gcgg  gcugccg g
    |||| |||| | ||||    ||||| || ||||  ||||||| g
3'  cguc cgac c cccu    agguc cu cgcc  cgauggu u
   a    -    g -    ----     u  a    --       c 
Get sequence
Deep sequencing
32 reads, 0 reads per million, 29 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (Rnor_6.0; GCA_000001895.4) Overlapping transcripts
chr1: 267672833-267672913 [-]
intergenic
Database links

Mature sequence rno-miR-3584-5p

Accession MIMAT0017875
Sequence

13 - 

gggaggaguccaggaggc

 - 30

Get sequence
Deep sequencing4 reads, 2 experiments
Evidence experimental; SOLiD [1]

Mature sequence rno-miR-3584-3p

Accession MIMAT0017876
Sequence

52 - 

gcccgcaucucuggauccc

 - 70

Get sequence
Deep sequencing24 reads, 12 experiments
Evidence experimental; SOLiD [1]

References

1
PMID:20403161 "Small RNA expression and strain specificity in the rat" Linsen SE, de Wit E, de Bruijn E, Cuppen E BMC Genomics. 11:249(2010).