Stem-loop sequence rno-mir-3564

Accession MI0015427
Description Rattus norvegicus miR-3564 stem-loop
Stem-loop 
g     -aa  -     acuauua       ucugua      -aa  -      -ca   aa 
 uucca   ca gcuuc       ucugucu      ucccuc   gc uuuccc   gug  c
 |||||   || |||||       |||||||      ||||||   || ||||||   |||  a
 agggu   gu cgagg       agacaga      agggag   cg aaaggg   cac  c
-     ggg  a     -----ag       ------      aaa  u      ucc   ga
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Genome context
Coordinates (RGSC3.4) Overlapping transcripts
19: 52056159-52056270 [+]
antisense
ENSRNOT00000025424 ; D3ZU48_RAT; intron 4
ENSRNOT00000025424 ; D3ZU48_RAT; intron 4
ENSRNOT00000025424 ; D3ZU48_RAT; intron 4
Database links

Mature sequence rno-miR-3564

Accession MIMAT0017837
Sequence

69 -  

ugggaaaugcaaagagggaag

 - 89

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Evidence experimental; SOLiD [1]
Predicted targets

References

1
PMID:20403161 "Small RNA expression and strain specificity in the rat" Linsen SE, de Wit E, de Bruijn E, Cuppen E BMC Genomics. 11:249(2010).