Stem-loop sequence sja-mir-3500

Accession MI0015324
Description Schistosoma japonicum miR-3500 stem-loop
Stem-loop 
uucg           aucg     a     ug    uu 
    caggaaaggag    guggu gauug  auug  u
    |||||||||||    ||||| |||||  ||||  g
    gucuuuuuuuc    uacua uuaau  uaau  c
auga           cuug     a     gu    ua
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Genome context
Coordinates (ASM15177v1) Overlapping transcripts
CABF01024340.1: 784-862 [+]
intergenic

Mature sequence sja-miR-3500

Accession MIMAT0016309
Sequence

11 -  

aggagaucggugguagauugu

 - 31

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Evidence experimental; Solexa [1]

References

1
PMID:20161724 "An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum" Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W PLoS Negl Trop Dis. 4:e596(2010).