Stem-loop sequence sja-mir-3487

Accession MI0015311
Description Schistosoma japonicum miR-3487 stem-loop
Stem-loop 
-gacg   c  u      --ac     -    ca c    cuu 
     ucc cg ccucga    uguug uggc  c gcac   c
     ||| || ||||||    ||||| ||||  | ||||   a
     agg gu ggaguu    acagc acug  g cgug   u
uaaca   a  -      aacc     g    -a a    cuc
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Genome context
Coordinates (ASM15177v1) Overlapping transcripts
CABF01025875.1: 5674-5756 [-]
intergenic
Clustered miRNAs
< 10kb from sja-mir-3487
sja-mir-3487 CABF01025875.1: 5674-5756 [-]
sja-mir-3489 CABF01025875.1: 5672-5758 [+]

Mature sequence sja-miR-3487

Accession MIMAT0016296
Sequence

11 -  

uccucgaacuguuguggcca

 - 30

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Evidence experimental; Solexa [1]

References

1
PMID:20161724 "An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum" Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W PLoS Negl Trop Dis. 4:e596(2010).