Stem-loop sequence nvi-mir-2a

AccessionMI0014727 (change log)
DescriptionNasonia vitripennis miR-2a stem-loop
Gene family MIPF0000049; mir-2
Stem-loop 
   gu     u   --g       -     -       u     -u g  u 
5'   ggaga cgc   ucgcuca caaag uggcugu guaug  c ga u
     ||||| |||   ||||||| ||||| ||||||| |||||  | || u
3'   cuucu gcg   ggcgagu guuuc accgaca uauac  g uu c
   uc     -   agu       u     g       c     uc g  u
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Nvit_2.1; GCA_000002325.2) Overlapping transcripts
chr1: 8079789-8079881 [+]
intergenic
Clustered miRNAs
< 10kb from nvi-mir-2a
nvi-mir-71chr1: 8079015-8079116 [+]
nvi-mir-2cchr1: 8079186-8079287 [+]
nvi-mir-13achr1: 8079335-8079437 [+]
nvi-mir-13bchr1: 8079595-8079686 [+]
nvi-mir-2achr1: 8079789-8079881 [+]
nvi-mir-2bchr1: 8080812-8080896 [+]
Database links

Mature sequence nvi-miR-2a

Accession MIMAT0015666
Sequence

56 -  

uaucacagccagcuuuguugagc

 - 78

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Evidence experimental; 454 [1]

References

1
PMID:20075255 "Functional and evolutionary insights from the genomes of three parasitoid Nasonia species" Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Beukeboom LW, Desplan C, Elsik CG, Grimmelikhuijzen CJ, Kitts P, Lynch JA, Murphy T, Oliveira DC, Smith CD, van Science. 327:343-348(2010).