Stem-loop sequence nvi-mir-33

AccessionMI0014718 (change log)
DescriptionNasonia vitripennis miR-33 stem-loop
Gene family MIPF0000070; mir-33
Community annotation

This text is a summary paragraph taken from the Wikipedia entry entitled miR-33. miRBase and Rfam are facilitating community annotation of microRNA families and entries in Wikipedia. Read more ...

miR-33 is a family of microRNA precursors, which are processed by the Dicer enzyme to give mature microRNAs. miR-33 is found in several animal species, including humans. In some species there is a single member of this family which gives the mature product mir-33. In humans there are two members of this family called mir-33a and mir-33b, which are located in intronic regions within two protein-coding genes for Sterol regulatory element-binding proteins (SREBP-2 and SREBP-1) respectively.

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Stem-loop
   uaugcaacgaaaauauu   u        a  -         uu c       gaaua 
5'                  guc gcuacgag gu gcauuguag  g auugcau     u
                    ||| |||||||| || |||||||||  | |||||||      
3'                  cgg ugguguuc ca cgugacguc  c ugacgug     u
   ----------------g   u        c  a         uu a       aaagu 
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Confidence
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Genome context
Coordinates (Nvit_2.1; GCA_000002325.2) Overlapping transcripts
chr1: 33184298-33184398 [-]
intergenic
Database links

Mature sequence nvi-miR-33

Accession MIMAT0015657
Sequence

31 - 

gugcauuguaguugcauug

 - 49

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Evidence not experimental

References

1
PMID:20075255 "Functional and evolutionary insights from the genomes of three parasitoid Nasonia species" Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Beukeboom LW, Desplan C, Elsik CG, Grimmelikhuijzen CJ, Kitts P, Lynch JA, Murphy T, Oliveira DC, Smith CD, van Science. 327:343-348(2010).