Stem-loop sequence aly-MIR3448

Accession MI0014664
Description Arabidopsis lyrata miR3448 stem-loop
Stem-loop 
         g     -c           c   --cu     -     u    
uauugacca gaaaa  aucuucagaca gag    uguca gucaa ucc 
||||||||| |||||  ||||||||||| |||    ||||| ||||| || c
auaacuggu uuuuu  uaggagucugu cuc    acagu caguu aga 
         g     uu           a   aaac     u     c
Get sequence
Deep sequencing
12 reads, 1 experiments

Mature sequence aly-miR3448-5p

Accession MIMAT0017731
Previous IDs aly-miR3448*
Sequence

7 -  

ccaggaaaacaucuucagaca

 - 27

Get sequence
Deep sequencing 1 reads, 1 experiments
Evidence experimental; Solexa [1], SOLiD [2]

Mature sequence aly-miR3448-3p

Accession MIMAT0017732
Previous IDs aly-miR3448
Sequence

74 -  

ucugaggauuuuuuuugugguc

 - 95

Get sequence
Deep sequencing 11 reads, 1 experiments
Evidence experimental; Solexa [1], SOLiD [2]

References

1
PMID:20407027 "MicroRNA gene evolution in Arabidopsis lyrata and Arabidopsis thaliana" Fahlgren N, Jogdeo S, Kasschau KD, Sullivan CM, Chapman EJ, Laubinger S, Smith LM, Dasenko M, Givan SA, Weigel D, Carrington JC Plant Cell. 22:1074-1089(2010).
2
PMID:20407023 "Arabidopsis lyrata small RNAs: transient MIRNA and small interfering RNA loci within the Arabidopsis genus" Ma Z, Coruh C, Axtell MJ Plant Cell. 22:1090-1103(2010).