Stem-loop sequence aly-MIR837

Accession MI0014644
Description Arabidopsis lyrata miR837 stem-loop
Gene family MIPF0001155; MIR837
Stem-loop 
         uc         u    -           u               uuu   uu 
uauaaaguc  cauguuuuu cauu guuucuuguuu uuucaagauuaugau   ugu  a
|||||||||  ||||||||| |||| ||||||||||| |||||||||||||||   |||   
auauuucag  guacaaaaa guag caaagaacaag aaaguucuaauacua   aca  a
         ga         -    u           c               ---   uu
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Mature sequence aly-miR837-5p

Accession MIMAT0017687
Sequence

22 -  

cauuguuucuuguuuuuuuca

 - 42

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Evidence experimental; Solexa [1], SOLiD [2]

Mature sequence aly-miR837-3p

Accession MIMAT0017688
Sequence

80 -  

aaacgaacaagaaacugauga

 - 100

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Evidence experimental; Solexa [1], SOLiD [2]

References

1
PMID:20407027 "MicroRNA gene evolution in Arabidopsis lyrata and Arabidopsis thaliana" Fahlgren N, Jogdeo S, Kasschau KD, Sullivan CM, Chapman EJ, Laubinger S, Smith LM, Dasenko M, Givan SA, Weigel D, Carrington JC Plant Cell. 22:1074-1089(2010).
2
PMID:20407023 "Arabidopsis lyrata small RNAs: transient MIRNA and small interfering RNA loci within the Arabidopsis genus" Ma Z, Coruh C, Axtell MJ Plant Cell. 22:1090-1103(2010).