Stem-loop sequence aly-MIR771

Accession MI0014598
Description Arabidopsis lyrata miR771 stem-loop
Gene family MIPF0001122; MIR771
Stem-loop 
    c        c    u  c        - a   a   cagua   u  au 
auuc acaugagc ucug gg agcccucg c aug ucu     gag gc  g
|||| |||||||| |||| || |||||||| | ||| |||     ||| ||  c
uaag uguacuug agac cc ucgggagu g ugc aga     uuc ug  c
    c        u    u  -        a a   -   -aaug   u  aa
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Mature sequence aly-miR771-5p

Accession MIMAT0017591
Previous IDs aly-miR771
Sequence

9 -  

ugagccucuguggcagcccuc

 - 29

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Evidence experimental; Solexa [1], SOLiD [2]

Mature sequence aly-miR771-3p

Accession MIMAT0017592
Previous IDs aly-miR771*
Sequence

80 -  

gggcuccucagauguucaug

 - 99

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Evidence experimental; Solexa [1], SOLiD [2]

References

1
PMID:20407027 "MicroRNA gene evolution in Arabidopsis lyrata and Arabidopsis thaliana" Fahlgren N, Jogdeo S, Kasschau KD, Sullivan CM, Chapman EJ, Laubinger S, Smith LM, Dasenko M, Givan SA, Weigel D, Carrington JC Plant Cell. 22:1074-1089(2010).
2
PMID:20407023 "Arabidopsis lyrata small RNAs: transient MIRNA and small interfering RNA loci within the Arabidopsis genus" Ma Z, Coruh C, Axtell MJ Plant Cell. 22:1090-1103(2010).