Stem-loop sequence aly-MIR167a

Accession MI0014539
Description Arabidopsis lyrata miR167a stem-loop
Gene family MIPF0000023; MIR167_1
Stem-loop 
     ac   -  u u a         c              -  -   -     a  u             
ggugc  cgg ca c g ugaagcugc agcaugaucuaauu ag cuu ucuuu ua cuguuguugugu 
|||||  ||| || | | ||||||||| |||||||||||||| || ||| ||||| || ||||||||||| u
ccacg  guc gu g c acuuugacg uuguacuagauuag uc gag agaga au gguagcaauacu 
     cu   a  u c c         c              c  u   u     -  u
Get sequence
Deep sequencing
3210 reads, 1 experiments

Mature sequence aly-miR167a-5p

Accession MIMAT0017473
Previous IDs aly-miR167a
Sequence

18 -  

ugaagcugccagcaugaucua

 - 38

Get sequence
Deep sequencing 3166 reads, 1 experiments
Evidence experimental; Solexa [1], SOLiD [2]

Mature sequence aly-miR167a-3p

Accession MIMAT0017474
Previous IDs aly-miR167a*
Sequence

102 -  

gaucauguucgcaguuucacc

 - 122

Get sequence
Deep sequencing 44 reads, 1 experiments
Evidence experimental; Solexa [1], SOLiD [2]

References

1
PMID:20407027 "MicroRNA gene evolution in Arabidopsis lyrata and Arabidopsis thaliana" Fahlgren N, Jogdeo S, Kasschau KD, Sullivan CM, Chapman EJ, Laubinger S, Smith LM, Dasenko M, Givan SA, Weigel D, Carrington JC Plant Cell. 22:1074-1089(2010).
2
PMID:20407023 "Arabidopsis lyrata small RNAs: transient MIRNA and small interfering RNA loci within the Arabidopsis genus" Ma Z, Coruh C, Axtell MJ Plant Cell. 22:1090-1103(2010).