Stem-loop sequence aly-MIR159c

Accession MI0014517
Description Arabidopsis lyrata miR159c stem-loop
Gene family MIPF0000010; MIR159
Stem-loop 
                -c      a         ca   uuug    acuaaaaagcaaaaucuaagaguucauggauuccucauagagagugcguagguuaacaucuugaa 
agaaggagcucccuuc  uccaaa cgaggagga  aga    agga                                                                 g
||||||||||||||||  |||||| |||||||||  |||    ||||                                                                 a
uuuuccucgagggaag  agguuu gcuucucuu  ucu    uccu                                                                 a
                uu      -         -c   ----    acauaucucucucucucucucucucucuauuagauucuccaguacgucaggggaauuucacacga
Get sequence
Deep sequencing
6293 reads, 1 experiments

Mature sequence aly-miR159c-5p

Accession MIMAT0017427
Previous IDs aly-miR159c*
Sequence

6 -  

gagcucccuuccuccaaaacg

 - 26

Get sequence
Evidence experimental; Solexa [1]

Mature sequence aly-miR159c-3p

Accession MIMAT0017428
Previous IDs aly-miR159c
Sequence

197 -  

uuuggauugaagggagcuccu

 - 217

Get sequence
Deep sequencing 6293 reads, 1 experiments
Evidence experimental; Solexa [1]

References

1
PMID:20407027 "MicroRNA gene evolution in Arabidopsis lyrata and Arabidopsis thaliana" Fahlgren N, Jogdeo S, Kasschau KD, Sullivan CM, Chapman EJ, Laubinger S, Smith LM, Dasenko M, Givan SA, Weigel D, Carrington JC Plant Cell. 22:1074-1089(2010).