Stem-loop sequence bmo-mir-3204b

Accession MI0014495
Description Bombyx mori miR-3204b stem-loop
Gene family MIPF0000908; mir-3204
Stem-loop 
u  augu     u a       c          u        au 
 ga    agaca c aggccug gucauaaacu cccauaug  u
 ||    ||||| | ||||||| |||||||||| ||||||||   
 cu    ucugu g uucgggu caguauuuga ggguauac  u
c  -guu     u c       u          -        cc
Get sequence
Deep sequencing
16 reads, 3 experiments
Genome context
Coordinates (SILKDB2.0) Overlapping transcripts
nscaf1690: 5500375-5500462 [+]
intergenic
Clustered miRNAs
< 10kb from bmo-mir-3204b
bmo-mir-3204b nscaf1690: 5500375-5500462 [+]
bmo-mir-3204a nscaf1690: 5503368-5503474 [+]

Mature sequence bmo-miR-3204b

Accession MIMAT0015638
Sequence

21 -  

ugcgucauaaacuucccauau

 - 41

Get sequence
Evidence experimental; SOLID [1]

References

1
PMID:20229201 "Novel microRNAs in silkworm (Bombyx mori)" Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J Funct Integr Genomics. 10:405-415(2010).