Stem-loop sequence bmo-mir-3395

Accession MI0014458
Description Bombyx mori miR-3395 stem-loop
Stem-loop 
g      a   --c  c  a       --u      -gu      c     ug  gggcg     c 
 acuggu gcu   cc gu guaccgg   gcgaug   ccgggc uggcu  gc     gccgu g
 |||||| |||   || || |||||||   ||||||   |||||| |||||  ||     |||||  
 uggcua cgg   gg ca cguggcu   cgcugu   ggcuug aucga  cg     cggua c
g      a   cau  a  g       ucu      agc      -     --  ----a     g
Get sequence
Deep sequencing
10 reads, 2 experiments
Genome context
Coordinates (SILKDB2.0) Overlapping transcripts
nscaf2686: 229253-229374 [-]
intergenic
Clustered miRNAs
< 10kb from bmo-mir-3395
bmo-mir-3396 nscaf2686: 230726-230869 [-]
bmo-mir-3395 nscaf2686: 229253-229374 [-]
bmo-mir-3394 nscaf2686: 224567-224688 [-]

Mature sequence bmo-miR-3395

Accession MIMAT0015599
Sequence

73 -  

agcuaguucggcgaugucgcucu

 - 95

Get sequence
Deep sequencing 1 reads, 1 experiments
Evidence experimental; SOLID [1]

References

1
PMID:20229201 "Novel microRNAs in silkworm (Bombyx mori)" Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J Funct Integr Genomics. 10:405-415(2010).