Stem-loop sequence bmo-mir-3362

Accession MI0014422
Description Bombyx mori miR-3362 stem-loop
Stem-loop 
aagcc        u   ga        ----    -      u     ccg   -  cug 
     guuuguga gcu  uuugaagu    uuau gaaugu guagc   gug gc   g
     |||||||| |||  ||||||||    |||| |||||| |||||   ||| ||    
     cagauauu ugg  gaauuuua    aaua uuuaua caucg   uac cg   u
----a        u   -a        ucuu    a      u     uag   a  ucu
Get sequence
Deep sequencing
77 reads, 3 experiments
Genome context
Coordinates (SILKDB2.0) Overlapping transcripts
nscaf2273: 8945-9055 [+]
intergenic
Clustered miRNAs
< 10kb from bmo-mir-3362
bmo-mir-3362 nscaf2273: 8945-9055 [+]
bmo-mir-3363 nscaf2273: 10986-11108 [+]

Mature sequence bmo-miR-3362

Accession MIMAT0015548
Sequence

17 -  

ugauuugaaguuuaugaauguugua

 - 41

Get sequence
Deep sequencing 74 reads, 3 experiments
Evidence experimental; SOLID [1]

References

1
PMID:20229201 "Novel microRNAs in silkworm (Bombyx mori)" Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J Funct Integr Genomics. 10:405-415(2010).