Stem-loop sequence bmo-mir-3204a

Accession MI0014256
Description Bombyx mori miR-3204a stem-loop
Gene family MIPF0000908; mir-3204
Stem-loop 
g     -auca   -    --  u a     cgc          u        au 
 caaga     aug uaga  ca c aggcc   gucauaaacu cccauaug  u
 |||||     ||| ||||  || | |||||   |||||||||| ||||||||   
 guucu     ugc gucu  gu g uucgg   caguauuuga ggguauac  u
a     gccac   u    cc  u c     auu          -        cc
Get sequence
Deep sequencing
33 reads, 3 experiments
Genome context
Coordinates (SILKDB2.0) Overlapping transcripts
nscaf1690: 5503368-5503474 [+]
intergenic
Clustered miRNAs
< 10kb from bmo-mir-3204a
bmo-mir-3204b nscaf1690: 5500375-5500462 [+]
bmo-mir-3204a nscaf1690: 5503368-5503474 [+]

Mature sequence bmo-miR-3204a-5p

Accession MIMAT0015381
Previous IDs bmo-miR-3204a
Sequence

28 -  

cgcgucauaaacuucccauau

 - 48

Get sequence
Deep sequencing 14 reads, 3 experiments
Evidence experimental; SOLID [1]

Mature sequence bmo-miR-3204a-3p

Accession MIMAT0015382
Previous IDs bmo-miR-3204a*
Sequence

58 -  

uaugggaguuuaugacuuagg

 - 78

Get sequence
Deep sequencing 10 reads, 2 experiments
Evidence experimental; SOLID [1]

References

1
PMID:20229201 "Novel microRNAs in silkworm (Bombyx mori)" Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J Funct Integr Genomics. 10:405-415(2010).