Stem-loop sequence hsa-mir-3197

Accession MI0014245
Description Homo sapiens miR-3197 stem-loop
Stem-loop 
           g  ca  c    a    c  g ga g 
ggcgaggggag cg  gg ucgg aagg gc c  g c
||||||||||| ||  || |||| |||| || |  |  
ucgcuccucuc gc  cc agcc uucc cg g  c u
           -  ca  u    c    u  - -a c
Get sequence
Deep sequencing
5 reads, 2 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr21: 42539484-42539556 [+]
antisense
OTTHUMT00000325302 ; TMPRSS3-009; intron 6
OTTHUMT00000325302 ; TMPRSS3-009; intron 6
ENST00000553129 ; TMPRSS3-009; intron 6
ENST00000553129 ; TMPRSS3-009; intron 6
Database links

Mature sequence hsa-miR-3197

Accession MIMAT0015082
Sequence

8 -  

ggaggcgcaggcucggaaaggcg

 - 30

Get sequence
Deep sequencing 5 reads, 2 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:20300190 "Characterization of the Melanoma miRNAome by Deep Sequencing" Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK PLoS One. 5:e9685(2010).