Stem-loop sequence hsa-mir-3196

Accession MI0014241
Description Homo sapiens miR-3196 stem-loop
Stem-loop 
  g      c       -ca       cccc 
gg uggggg ggggcgg   ggggccu    c
|| |||||| |||||||   |||||||    a
uc acccuc cuucguc   ccccgga    g
  g      u       uua       ccgu
Get sequence
Deep sequencing
335 reads, 15 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr20: 61870131-61870194 [+]
sense
OTTHUMT00000080115 ; BIRC7-003; intron 2
OTTHUMT00000080115 ; BIRC7-003; intron 2
OTTHUMT00000080115 ; BIRC7-003; intron 2
OTTHUMT00000080113 ; BIRC7-001; intron 4
OTTHUMT00000080114 ; BIRC7-002; intron 4
OTTHUMT00000080113 ; BIRC7-001; intron 4
OTTHUMT00000080114 ; BIRC7-002; intron 4
OTTHUMT00000080113 ; BIRC7-001; intron 4
OTTHUMT00000080114 ; BIRC7-002; intron 4
ENST00000395306 ; BIRC7-003; intron 2
ENST00000395306 ; BIRC7-003; intron 2
ENST00000395306 ; BIRC7-003; intron 2
ENST00000342412 ; BIRC7-001; intron 4
ENST00000217169 ; BIRC7-002; intron 4
ENST00000342412 ; BIRC7-001; intron 4
ENST00000217169 ; BIRC7-002; intron 4
ENST00000342412 ; BIRC7-001; intron 4
ENST00000217169 ; BIRC7-002; intron 4
Database links

Mature sequence hsa-miR-3196

Accession MIMAT0015080
Sequence

10 -  

cggggcggcaggggccuc

 - 27

Get sequence
Deep sequencing 214 reads, 14 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:20300190 "Characterization of the Melanoma miRNAome by Deep Sequencing" Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK PLoS One. 5:e9685(2010).