Stem-loop sequence hsa-mir-3195

Accession MI0014240
Description Homo sapiens miR-3195 stem-loop
Stem-loop 
---cc      g    g  g g   ggguu        ---a      
     gcagcc ccgc cc g ccc     ggccgcug    ccccc 
     |||||| |||| || | |||     ||||||||    |||| g
     cgucgg ggcg gg c ggg     ccggcggc    ggggc 
ggccc      g    g  g g   -----        cccc
Get sequence
Deep sequencing
567 reads, 27 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr20: 60639858-60639941 [+]
antisense
OTTHUMT00000079968 ; TAF4-001; exon 1
OTTHUMT00000079968 ; TAF4-001; exon 1
OTTHUMT00000079968 ; TAF4-001; exon 1
OTTHUMT00000079969 ; TAF4-002; exon 3
OTTHUMT00000079969 ; TAF4-002; exon 3
OTTHUMT00000079969 ; TAF4-002; exon 3
ENST00000252996 ; TAF4-001; exon 1
ENST00000252996 ; TAF4-001; exon 1
ENST00000252996 ; TAF4-001; exon 1
ENST00000436129 ; TAF4-002; exon 3
ENST00000436129 ; TAF4-002; exon 3
ENST00000436129 ; TAF4-002; exon 3
Database links

Mature sequence hsa-miR-3195

Accession MIMAT0015079
Sequence

11 -  

cgcgccgggcccggguu

 - 27

Get sequence
Deep sequencing 425 reads, 13 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:20300190 "Characterization of the Melanoma miRNAome by Deep Sequencing" Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK PLoS One. 5:e9685(2010).