Stem-loop sequence hsa-mir-3192

Accession

MI0014237

Description

Homo sapiens miR-3192 stem-loop

Gene family

MIPF0001597; mir-3192

Stem-loop

        --uu        u  uag   u    a   u 
ggaaggga    cugggagg ug   cag ggaa aag u
||||||||    |||||||| ||   ||| |||| |||  
ucuuccuu    gacucucc gc   guc ccuu uuu c
        ucuc        c  -ua   u    c   u 

Deep sequencing

85 reads, 10 experiments

Genome context

• Coordinates (GRCh37.p5): chr20: 18451259-18451335 [+]
• Overlapping transcripts:

  sense

  OTTHUMT00000078173 ; POLR3F-004; intron 1

  OTTHUMT00000078174 ; POLR3F-005; intron 1

  OTTHUMT00000078173 ; POLR3F-004; intron 1

  OTTHUMT00000078174 ; POLR3F-005; intron 1

  OTTHUMT00000078173 ; POLR3F-004; intron 1

  OTTHUMT00000078174 ; POLR3F-005; intron 1

  OTTHUMT00000078170 ; POLR3F-001; intron 2

  OTTHUMT00000127748 ; POLR3F-002; intron 2

  OTTHUMT00000127749 ; POLR3F-006; intron 2

  OTTHUMT00000078170 ; POLR3F-001; intron 2

  OTTHUMT00000127748 ; POLR3F-002; intron 2

  OTTHUMT00000127749 ; POLR3F-006; intron 2

  OTTHUMT00000078170 ; POLR3F-001; intron 2

  OTTHUMT00000127748 ; POLR3F-002; intron 2

  OTTHUMT00000127749 ; POLR3F-006; intron 2

  ENST00000497333 ; POLR3F-004; intron 1

  ENST00000489753 ; POLR3F-005; intron 1

  ENST00000497333 ; POLR3F-004; intron 1

  ENST00000489753 ; POLR3F-005; intron 1

  ENST00000497333 ; POLR3F-004; intron 1

  ENST00000489753 ; POLR3F-005; intron 1

  ENST00000377603 ; POLR3F-001; intron 2

  ENST00000462997 ; POLR3F-002; intron 2

  ENST00000475192 ; POLR3F-006; intron 2

  ENST00000377603 ; POLR3F-001; intron 2

  ENST00000462997 ; POLR3F-002; intron 2

  ENST00000475192 ; POLR3F-006; intron 2

  ENST00000377603 ; POLR3F-001; intron 2

  ENST00000462997 ; POLR3F-002; intron 2

  ENST00000475192 ; POLR3F-006; intron 2

Database links

• ENTREZGENE: 100422875;MIR3192

Mature sequence hsa-miR-3192

• Accession: MIMAT0015076
• Sequence: 10 - ucugggagguuguagcaguggaa - 32
• Deep sequencing: 85 reads, 10 experiments
• Evidence: experimental; Solexa [1-2]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-3192
  • MICRORNA.ORG:hsa-miR-3192
  • MIRDB:hsa-miR-3192
  • RNA22-HSA:hsa-miR-3192
  • TARGETMINER:hsa-miR-3192

References

1. PMID:20300190 "Characterization of the Melanoma miRNAome by Deep Sequencing" Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK PLoS One. 5:e9685(2010).
2. PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).