Stem-loop sequence hsa-mir-3190

Accession MI0014235
Description Homo sapiens miR-3190 stem-loop
Gene family MIPF0001251; mir-3190
Stem-loop 
            g       ag    -g   c   -   c 
cuggggucaccu ucuggcc  cuac  ucc cac ggc c
|||||||||||| |||||||  ||||  ||| ||| |||  
ggccccagugga agaccgg  gaug  agg gug cug u
            g       ca    ga   u   a   u
Get sequence
Deep sequencing
144 reads, 13 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr19: 47730199-47730278 [+]
antisense
ENST00000300880 ; BBC3-201; intron 1
ENST00000341983 ; BBC3-202; intron 1
ENST00000300880 ; BBC3-201; intron 1
ENST00000341983 ; BBC3-202; intron 1
ENST00000300880 ; BBC3-201; intron 1
ENST00000341983 ; BBC3-202; intron 1
ENST00000449228 ; BBC3-204; intron 2
ENST00000439096 ; BBC3-203; intron 2
ENST00000449228 ; BBC3-204; intron 2
ENST00000439096 ; BBC3-203; intron 2
ENST00000449228 ; BBC3-204; intron 2
ENST00000439096 ; BBC3-203; intron 2
Clustered miRNAs
< 10kb from hsa-mir-3190
hsa-mir-3190 chr19: 47730199-47730278 [+]
hsa-mir-3191 chr19: 47730201-47730276 [-]
Database links

Mature sequence hsa-miR-3190-5p

Accession MIMAT0015073
Previous IDs hsa-miR-3190-5p;hsa-miR-3190
Sequence

14 -  

ucuggccagcuacgucccca

 - 33

Get sequence
Evidence experimental; Solexa [2]
Predicted targets

Mature sequence hsa-miR-3190-3p

Accession MIMAT0022839
Sequence

47 -  

uguggaagguagacggccagaga

 - 69

Get sequence
Deep sequencing 142 reads, 11 experiments
Evidence experimental; Solexa [1-2]
Predicted targets

References

1
PMID:20300190 "Characterization of the Melanoma miRNAome by Deep Sequencing" Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK PLoS One. 5:e9685(2010).
2
PMID:21606961 "Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia" Schotte D, Moqadam FA, Lange-Turenhout EA, Chen C, van Ijcken WF, Pieters R, den Boer ML Leukemia. 25:1389-1399(2011).