Stem-loop sequence hsa-mir-3156-2

Accession MI0014230
Description Homo sapiens miR-3156-2 stem-loop
Gene family MIPF0000891; mir-3156
Stem-loop 
      -                     a    uucac 
ugcaga agaaagaucuggaagugggag cacu     u
|||||| ||||||||||||||||||||| ||||      
augucu ucuuucuagaccuucacccuc guga     a
      c                     g    uauau
Get sequence
Deep sequencing
6 reads, 3 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr18: 14830165-14830241 [+]
sense
OTTHUMT00000443557 ; ANKRD30B-001; intron 27
ENST00000320584 ; ANKRD30B-202; intron 11
ENST00000320584 ; ANKRD30B-202; intron 11
ENST00000277669 ; ANKRD30B-201; intron 12
ENST00000277669 ; ANKRD30B-201; intron 12
ENST00000358984 ; ANKRD30B-203; intron 27
ENST00000358984 ; ANKRD30B-203; intron 27
ENST00000358984 ; ANKRD30B-001; intron 27
Database links

Mature sequence hsa-miR-3156-5p

Accession MIMAT0015030
Previous IDs hsa-miR-3156
Sequence

9 -  

aaagaucuggaagugggagaca

 - 30

Get sequence
Deep sequencing 18 reads, 3 experiments
Evidence experimental; Solexa [1-2]
Predicted targets

Mature sequence hsa-miR-3156-3p

Accession MIMAT0019209
Sequence

50 -  

cucccacuuccagaucuuucu

 - 70

Get sequence
Evidence experimental; Solexa [2]
Predicted targets

References

1
PMID:20300190 "Characterization of the Melanoma miRNAome by Deep Sequencing" Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK PLoS One. 5:e9685(2010).
2
PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).