Stem-loop sequence hsa-mir-3186

Accession MI0014229
Description Homo sapiens miR-3186 stem-loop
Stem-loop 
     gc        c  g     g  ua        -c     
agccu  gguuccaa ag cgucu uc  cguggcuu  aacc 
|||||  |||||||| || ||||| ||  ||||||||  ||| a
ucggg  ccaagguu uc guaga ag  gcacugaa  uuga 
     ga        -  g     g  gc        ac
Get sequence
Deep sequencing
22 reads, 3 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr17: 79418130-79418214 [-]
antisense
OTTHUMT00000439905 ; RP11-1055B8.7-001; intron 9
OTTHUMT00000439905 ; RP11-1055B8.7-001; intron 9
ENST00000571813 ; BAHCC1-001; intron 9
ENST00000571813 ; BAHCC1-001; intron 9
ENST00000307745 ; AC110285.1-201; intron 15
ENST00000307745 ; BAHCC1-201; intron 15
ENST00000307745 ; BAHCC1-201; intron 15
Database links

Mature sequence hsa-miR-3186-5p

Accession MIMAT0015067
Sequence

16 -  

caggcgucugucuacguggcuu

 - 37

Get sequence
Deep sequencing 6 reads, 1 experiments
Evidence experimental; Solexa [1-2]
Predicted targets

Mature sequence hsa-miR-3186-3p

Accession MIMAT0015068
Sequence

53 -  

ucacgcggagagauggcuuug

 - 73

Get sequence
Deep sequencing 16 reads, 3 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:20300190 "Characterization of the Melanoma miRNAome by Deep Sequencing" Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK PLoS One. 5:e9685(2010).
2
PMID:20224791 "Discovery of novel microRNAs in female reproductive tract using next generation sequencing" Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH PLoS One. 5:e9637(2010).