Stem-loop sequence hsa-mir-3185

Accession MI0014227
Description Homo sapiens miR-3185 stem-loop
Stem-loop 
-ga     aga         uc  -       gag 
   augga   agaaggcgg  gg ucugcgg   c
   |||||   |||||||||  || |||||||    
   uaccu   ucuuccgcc  cc agacgcc   c
cug     --g         ua  g       gga
Get sequence
Deep sequencing
12 reads, 1 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr17: 46801770-46801837 [-]
antisense
OTTHUMT00000255115 ; C17orf93-001; exon 2
OTTHUMT00000255116 ; C17orf93-002; exon 2
OTTHUMT00000255115 ; C17orf93-001; exon 2
OTTHUMT00000255116 ; C17orf93-002; exon 2
OTTHUMT00000255115 ; C17orf93-001; exon 2
OTTHUMT00000255116 ; C17orf93-002; exon 2
ENST00000422730 ; HOXB13-AS1-001; exon 2
ENST00000432056 ; HOXB13-AS1-002; exon 2
ENST00000422730 ; HOXB-AS5-001; exon 2
ENST00000432056 ; HOXB-AS5-002; exon 2
ENST00000422730 ; HOXB-AS5-001; exon 2
ENST00000432056 ; HOXB-AS5-002; exon 2
Database links

Mature sequence hsa-miR-3185

Accession MIMAT0015065
Sequence

8 -  

agaagaaggcggucggucugcgg

 - 30

Get sequence
Deep sequencing 12 reads, 1 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:20300190 "Characterization of the Melanoma miRNAome by Deep Sequencing" Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK PLoS One. 5:e9685(2010).