Stem-loop sequence hsa-mir-1193

Accession MI0014205
Description Homo sapiens miR-1193 stem-loop
Gene family MIPF0000714; mir-1193
Stem-loop 
gua    a g       -    c      g    cu  au 
   gcug g ggauggu agac ggugac ugca  uc  u
   |||| | ||||||| |||| |||||| ||||  ||   
   cgac c ccuauca uuug ccacug augu  ag  u
ccg    - a       g    c      g    --  ca
Get sequence
Deep sequencing
10 reads, 1 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr14: 101496389-101496466 [+]
sense
ENST00000408109 ; MIR1193-201; exon 1
ENST00000408109 ; MIR1193-201; exon 1
Clustered miRNAs
< 10kb from hsa-mir-1193
hsa-mir-379 chr14: 101488403-101488469 [+]
hsa-mir-411 chr14: 101489662-101489757 [+]
hsa-mir-299 chr14: 101490131-101490193 [+]
hsa-mir-380 chr14: 101491354-101491414 [+]
hsa-mir-1197 chr14: 101491901-101491988 [+]
hsa-mir-323a chr14: 101492069-101492154 [+]
hsa-mir-758 chr14: 101492357-101492444 [+]
hsa-mir-329-1 chr14: 101493122-101493201 [+]
hsa-mir-329-2 chr14: 101493437-101493520 [+]
hsa-mir-494 chr14: 101495971-101496051 [+]
hsa-mir-1193 chr14: 101496389-101496466 [+]
hsa-mir-543 chr14: 101498324-101498401 [+]
hsa-mir-495 chr14: 101500092-101500173 [+]
hsa-mir-376c chr14: 101506027-101506092 [+]
Database links

Mature sequence hsa-miR-1193

Accession MIMAT0015049
Sequence

10 -  

gggaugguagaccggugacgugc

 - 32

Get sequence
Deep sequencing 10 reads, 1 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:20300190 "Characterization of the Melanoma miRNAome by Deep Sequencing" Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK PLoS One. 5:e9685(2010).