Stem-loop sequence hsa-mir-3134

Accession

MI0014155

Description

Homo sapiens miR-3134 stem-loop

Stem-loop

u                         c   c  gga 
 guauccaauguguagucuuuuaucc uca au   g
 ||||||||||||||||||||||||| ||| ||    
 cauggguuauacaucagaaaauagg agu ua   u
a                         u   a  aaa 

Deep sequencing

reads, experiments

Genome context

• Coordinates (GRCh37.p5): chr3: 15738805-15738878 [-]
• Overlapping transcripts:

  sense

  OTTHUMT00000340223 ; ANKRD28-007; intron 13

  OTTHUMT00000340223 ; ANKRD28-007; intron 13

  OTTHUMT00000340223 ; ANKRD28-007; intron 13

  OTTHUMT00000339756 ; ANKRD28-001; intron 14

  OTTHUMT00000339758 ; ANKRD28-003; intron 14

  OTTHUMT00000339759 ; ANKRD28-004; intron 14

  OTTHUMT00000340222 ; ANKRD28-006; intron 14

  OTTHUMT00000339756 ; ANKRD28-001; intron 14

  OTTHUMT00000339758 ; ANKRD28-003; intron 14

  OTTHUMT00000339759 ; ANKRD28-004; intron 14

  OTTHUMT00000340222 ; ANKRD28-006; intron 14

  OTTHUMT00000339756 ; ANKRD28-001; intron 14

  OTTHUMT00000339758 ; ANKRD28-003; intron 14

  OTTHUMT00000339759 ; ANKRD28-004; intron 14

  OTTHUMT00000340222 ; ANKRD28-006; intron 14

  ENST00000451422 ; ANKRD28-007; intron 13

  ENST00000451422 ; ANKRD28-007; intron 13

  ENST00000451422 ; ANKRD28-007; intron 13

  ENST00000399451 ; ANKRD28-003; intron 14

  ENST00000412318 ; ANKRD28-001; intron 14

  ENST00000497037 ; ANKRD28-004; intron 14

  ENST00000498524 ; ANKRD28-006; intron 14

  ENST00000383777 ; ANKRD28-201; intron 14

  ENST00000399451 ; ANKRD28-003; intron 14

  ENST00000412318 ; ANKRD28-001; intron 14

  ENST00000497037 ; ANKRD28-004; intron 14

  ENST00000498524 ; ANKRD28-006; intron 14

  ENST00000383777 ; ANKRD28-201; intron 14

  ENST00000399451 ; ANKRD28-003; intron 14

  ENST00000412318 ; ANKRD28-001; intron 14

  ENST00000497037 ; ANKRD28-004; intron 14

  ENST00000498524 ; ANKRD28-006; intron 14

  ENST00000383777 ; ANKRD28-201; intron 14

Database links

• ENTREZGENE: 100422990;MIR3134

Mature sequence hsa-miR-3134

• Accession: MIMAT0015000
• Sequence: 45 - ugauggauaaaagacuacauauu - 67
• Evidence: experimental; Solexa [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-3134
  • MICRORNA.ORG:hsa-miR-3134
  • MIRDB:hsa-miR-3134
  • RNA22-HSA:hsa-miR-3134
  • TARGETMINER:hsa-miR-3134

References

1. PMID:20300190 "Characterization of the Melanoma miRNAome by Deep Sequencing" Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK PLoS One. 5:e9685(2010).