Stem-loop sequence mmu-mir-3101

Accession MI0014093
Description Mus musculus miR-3101 stem-loop
Stem-loop 
 ug   uagg       u      g           uacuau   c 
g  ggg    uagcagg accauu acuaaagcuag      agg u
|  |||    ||||||| |||||| |||||||||||      |||  
c  cuc    aucguuu ugguag ugguuucgauc      ucc u
 gu   uuga       c      g           ------   g
Get sequence
Deep sequencing
137 reads, 39 experiments
Genome context
Coordinates (GRCm38) Overlapping transcripts
chr7: 27176006-27176093 [-]
sense
OTTMUST00000054746 ; Rab4b-005; intron 2
OTTMUST00000054747 ; Rab4b-006; intron 2
OTTMUST00000054743 ; Rab4b-002; exon 2
OTTMUST00000054744 ; Rab4b-003; intron 2
OTTMUST00000054742 ; Rab4b-001; intron 2
OTTMUST00000054748 ; Rab4b-007; exon 3
OTTMUST00000111252 ; RP24-68L4.1-001; 3'UTR (exon 4)
ENSMUST00000128409 ; Rab4b-005; intron 2
ENSMUST00000152753 ; Rab4b-006; intron 2
ENSMUST00000134462 ; Rab4b-002; exon 2
ENSMUST00000153511 ; Rab4b-003; intron 2
ENSMUST00000093040 ; Rab4b-001; intron 2
ENSMUST00000141906 ; Rab4b-007; exon 3
ENSMUST00000154724 ; RP24-68L4.1-001; 3'UTR (exon 4)
Database links

Mature sequence mmu-miR-3101-5p

Accession MIMAT0014921
Previous IDs mmu-miR-3101
Sequence

16 -  

gguaccauugacuaaagcuag

 - 36

Get sequence
Deep sequencing 44 reads, 19 experiments
Evidence experimental; Solexa [1]
Predicted targets

Mature sequence mmu-miR-3101-3p

Accession MIMAT0014922
Previous IDs mmu-miR-3101*
Sequence

54 -  

uagcuuugguggauggucuuu

 - 74

Get sequence
Deep sequencing 93 reads, 25 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).