Stem-loop sequence mmu-mir-3088

Accession MI0014081
Description Mus musculus miR-3088 stem-loop
Stem-loop 
------   ug   gcua                 u  ggc 
      cag  ccu    ugcaguuguucaugagc cu   u
      |||  |||    ||||||||||||||||| ||    
      guu  gga    acgucgacgaguacuug ga   c
gucguc   gu   ---a                 -  agc
Get sequence
Deep sequencing
54 reads, 26 experiments
Genome context
Coordinates (GRCm38) Overlapping transcripts
chr2: 28733278-28733351 [+]
sense
OTTMUST00000027604 ; RP23-362N19.5-001; intron 5
OTTMUST00000027605 ; RP23-362N19.5-002; intron 6
ENSMUST00000074156 ; Ak8-001; intron 5
ENSMUST00000123794 ; Ak8-002; intron 6
Database links

Mature sequence mmu-miR-3088-5p

Accession MIMAT0014897
Previous IDs mmu-miR-3088*
Sequence

9 -  

gcuaugcaguuguucaugagcu

 - 30

Get sequence
Deep sequencing 5 reads, 5 experiments
Evidence experimental; Solexa [1]
Predicted targets

Mature sequence mmu-miR-3088-3p

Accession MIMAT0014898
Previous IDs mmu-miR-3088
Sequence

44 -  

uucaugagcagcugcaaaggugu

 - 66

Get sequence
Deep sequencing 48 reads, 24 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).