Stem-loop sequence mmu-mir-466n

Accession MI0014079
Description Mus musculus miR-466n stem-loop
Gene family MIPF0000316; mir-467
Stem-loop 
                          gua      c        au 
guaugugcauguguguuugugugugc   caugua augugugu  a
||||||||||||||||||||||||||   |||||| ||||||||   
cguguacgugcacacagauacauacg   guacau uacguaua  u
                          aga      a        ag
Get sequence
Deep sequencing
1064 reads, 65 experiments
Genome context
Coordinates (GRCm38) Overlapping transcripts
chr2: 10513741-10513834 [+]
sense
OTTMUST00000026263 ; Sfmbt2-001; intron 10
ENSMUST00000041105 ; Sfmbt2-001; intron 10
ENSMUST00000116594 ; Sfmbt2-201; intron 11
Clustered miRNAs
< 10kb from mmu-mir-466n
mmu-mir-669a-12 chr2: 10503791-10503877 [+]
mmu-mir-467e chr2: 10505721-10505807 [+]
mmu-mir-466p chr2: 10506006-10506094 [+]
mmu-mir-467d chr2: 10507630-10507714 [+]
mmu-mir-466a chr2: 10507918-10507990 [+]
mmu-mir-297c chr2: 10509016-10509113 [+]
mmu-mir-669c chr2: 10509296-10509404 [+]
mmu-mir-669a-2 chr2: 10510164-10510260 [+]
mmu-mir-297b chr2: 10511667-10511775 [+]
mmu-mir-466d chr2: 10511967-10512062 [+]
mmu-mir-669m-1 chr2: 10512790-10512887 [+]
mmu-mir-669m-2 chr2: 10513434-10513531 [+]
mmu-mir-466n chr2: 10513741-10513834 [+]
mmu-mir-669o chr2: 10514300-10514395 [+]
mmu-mir-466g chr2: 10514595-10514674 [+]
mmu-mir-466h chr2: 10514891-10514971 [+]
mmu-mir-297a-3 chr2: 10515820-10515921 [+]
mmu-mir-466l chr2: 10516097-10516217 [+]
mmu-mir-297a-4 chr2: 10517067-10517164 [+]
mmu-mir-669i chr2: 10517604-10517730 [+]
mmu-mir-669h chr2: 10518155-10518279 [+]
Database links

Mature sequence mmu-miR-466n-5p

Accession MIMAT0014893
Sequence

19 -  

gugugugcguacauguacaugu

 - 40

Get sequence
Deep sequencing 759 reads, 49 experiments
Evidence experimental; Solexa [1]
Predicted targets

Mature sequence mmu-miR-466n-3p

Accession MIMAT0014894
Sequence

58 -  

uauacaugagagcauacauaga

 - 79

Get sequence
Deep sequencing 284 reads, 50 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).