Stem-loop sequence mmu-mir-669p-1

Accession MI0014064
Description Mus musculus miR-669p-1 stem-loop
Gene family MIPF0000316; mir-467
Stem-loop 
    a     g    -  -        c     c    c   au 
gugc ugugu uaua gu ugugugug auguu augu uau  u
|||| ||||| |||| || |||||||| ||||| |||| |||   
cacg acgca auau ca acacacac uacaa uaca aua  u
    a     a    g  c        a     -    u   ag
Get sequence
Deep sequencing
8267 reads, 79 experiments
Genome context
Coordinates (GRCm38) Overlapping transcripts
chr2: 10489116-10489202 [+]
sense
OTTMUST00000026263 ; Sfmbt2-001; intron 10
ENSMUST00000041105 ; Sfmbt2-001; intron 10
ENSMUST00000116594 ; Sfmbt2-201; intron 11
Clustered miRNAs
< 10kb from mmu-mir-669p-1
mmu-mir-669a-4 chr2: 10479315-10479401 [+]
mmu-mir-467b chr2: 10481248-10481320 [+]
mmu-mir-466c-1 chr2: 10481534-10481617 [+]
mmu-mir-669a-5 chr2: 10481761-10481847 [+]
mmu-mir-467a-3 chr2: 10483678-10483760 [+]
mmu-mir-466c-2 chr2: 10483966-10484055 [+]
mmu-mir-669a-6 chr2: 10484196-10484282 [+]
mmu-mir-467a-4 chr2: 10486135-10486217 [+]
mmu-mir-466b-4 chr2: 10486423-10486512 [+]
mmu-mir-669a-7 chr2: 10486653-10486739 [+]
mmu-mir-467a-5 chr2: 10488599-10488681 [+]
mmu-mir-466b-5 chr2: 10488887-10488974 [+]
mmu-mir-669p-1 chr2: 10489116-10489202 [+]
mmu-mir-467a-6 chr2: 10491048-10491130 [+]
mmu-mir-669a-8 chr2: 10491566-10491652 [+]
mmu-mir-467a-7 chr2: 10493510-10493592 [+]
mmu-mir-466b-6 chr2: 10493798-10493887 [+]
mmu-mir-669a-9 chr2: 10494028-10494114 [+]
mmu-mir-467a-8 chr2: 10495980-10496062 [+]
mmu-mir-466b-7 chr2: 10496268-10496355 [+]
mmu-mir-669p-2 chr2: 10496497-10496583 [+]
mmu-mir-467a-9 chr2: 10498393-10498475 [+]
mmu-mir-466b-2 chr2: 10498685-10498766 [+]
mmu-mir-669a-10 chr2: 10498911-10498997 [+]
Database links

Mature sequence mmu-miR-669p-5p

Accession MIMAT0014889
Previous IDs mmu-miR-669p
Sequence

15 -  

aguugugugugcauguucaugucu

 - 38

Get sequence
Deep sequencing 15073 reads, 72 experiments
Evidence experimental; Solexa [1]
Predicted targets

Mature sequence mmu-miR-669p-3p

Accession MIMAT0014890
Previous IDs mmu-miR-669p*
Sequence

52 -  

cauaacauacacacacacacguau

 - 75

Get sequence
Deep sequencing 1165 reads, 64 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).